BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022A04SP1|AL427845
(836 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1626 1657 0.0
>3x_Contig1626
Length = 17698
Score = 1657 bits (836), Expect = 0.0
Identities = 836/836 (100%)
Strand = Plus / Minus
Query: 1 gatcgataaaatcaagcaccatatccaattgatgaagcataggatccattccgttatcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6065 gatcgataaaatcaagcaccatatccaattgatgaagcataggatccattccgttatcac 6006
Query: 61 caaggttgtcaatatgacacactctaaatccatcttgttcagtaatattgatgaccgatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6005 caaggttgtcaatatgacacactctaaatccatcttgttcagtaatattgatgaccgatg 5946
Query: 121 ctgcttgagaattagcggtaggtaaaacattaaacgaattgctccgttttctctccatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5945 ctgcttgagaattagcggtaggtaaaacattaaacgaattgctccgttttctctccatat 5886
Query: 181 ttcttgctggtaatgtaatctcttcattaacagtattagatcttggtctacaccacgaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5885 ttcttgctggtaatgtaatctcttcattaacagtattagatcttggtctacaccacgaaa 5826
Query: 241 cggattctccaacggagatgatatttcttattcctaattcttttaacatttcagggcatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5825 cggattctccaacggagatgatatttcttattcctaattcttttaacatttcagggcatt 5766
Query: 301 gtgcatgtttaagggaccccagatataaatggggaaggatccttgacggtaaaggacctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5765 gtgcatgtttaagggaccccagatataaatggggaaggatccttgacggtaaaggacctt 5706
Query: 361 tgcatttcaagaacggtgaatcagttggtggttttatgaagaatattttactgaaagtat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5705 tgcatttcaagaacggtgaatcagttggtggttttatgaagaatattttactgaaagtat 5646
Query: 421 ccgcatctatagtcaatggtagctttggatcggtcgtttcatttctcatgggagaatact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5645 ccgcatctatagtcaatggtagctttggatcggtcgtttcatttctcatgggagaatact 5586
Query: 481 gtcttaatagtgtctctagatgtgataaaacctgaatgtcaatcaagaacaggaagaatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5585 gtcttaatagtgtctctagatgtgataaaacctgaatgtcaatcaagaacaggaagaatg 5526
Query: 541 gcctgtcatattttttatgcaaatcgaatatcacttcatctaaggatttgtcgagtttaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5525 gcctgtcatattttttatgcaaatcgaatatcacttcatctaaggatttgtcgagtttaa 5466
Query: 601 agatcaaatatgcaacgagtaggaatgatgtctctgtgtatccatctggcgagaagacta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5465 agatcaaatatgcaacgagtaggaatgatgtctctgtgtatccatctggcgagaagacta 5406
Query: 661 atttgttttgcgggtagaattctaacaaatggcaaacgtttaaaattgtttgaatggaat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5405 atttgttttgcgggtagaattctaacaaatggcaaacgtttaaaattgtttgaatggaat 5346
Query: 721 ctaagtttaaatttcccagtccgatagagccggaactaggaaaactcaaccagacgggag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5345 ctaagtttaaatttcccagtccgatagagccggaactaggaaaactcaaccagacgggag 5286
Query: 781 tatccacaggatgtttgattaactctgaaattttctccaaagacggcagttgagcg 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5285 tatccacaggatgtttgattaactctgaaattttctccaaagacggcagttgagcg 5230
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6460
Number of Sequences: 1807
Number of extensions: 6460
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 836
length of database: 10,358,551
effective HSP length: 16
effective length of query: 820
effective length of database: 10,329,639
effective search space: 8470303980
effective search space used: 8470303980
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)